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Kenneth Acosta

Rutgers, the State University of New Jersey

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CAREERS, ACCESS CSSN

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bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp+ 9 more

Elie Alhajjar

United States Military Academy

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Ana Ayala Pazzi

University of Texas Rio Grande Valley

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biology

Michael Blackmon

Davidson College

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Campus Champions, ACCESS CSSN

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Wesley Brashear

Texas A&M University

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r python bioinformatics biology genomics

Katia Bulekova

Boston University

Manager of Scientific Programming and Applications

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ACCESS CSSN, Campus Champions, CAREERS, CCMNet, Northeast

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David Carlson

SUNY at Stony Brook

Programs

ACCESS CSSN, OnDemand

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gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity+ 7 more

Christina Divoll

Tufts University

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Campus Champions, ACCESS CSSN

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Jacob Fosso Tande

North Carolina State University

Computational Scientist

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sciencedmz data-transfer github jekyll research-facilitation training version-control community-outreach dft computational-chemistry gaussian quantum-mechanics fortran git bash c++python scripting azure cluster-support file-transfer globus compiling software-installation debugging dependencies jupyterhub kubernetes administering-hpc NAIRR-pilot linear-programming data-analysis big-data image-processing aws cloud-computing cloudlab cloud cloud-commercial data-lifecycle data-management data-sharing data-reproducibility data-provenance data-management-software database github-pages workflow storage s3 quota metadata memory IO-issue profiling performance-tuning benchmarking cpu-bound hpc-storage hpc-operations hpc-getting-started dtn gpu nvidia unix-environment environment-modules modules os permissions ssh ACCESS ACCESS-allocations bridges-2 expanse jetstream open-science-grid stampede3 campus-champions abstract proposal-development workforce-development software-carpentry research-grants professional-development mentorship citation gcc programming-best-practices programming lsf pbs schedulers core-hours job-submission job-sizing resources chemistry data-compliance containers pip singularity interactive-mode library-paths lmod docker+ 100 more

Fernando Garzon

University of California, San Diego

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Xiaoqin Huang

Rice University

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ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation+ 83 more

Masoud Keramati

Northeastern University

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shuai liu

University of Arkansas

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woman facing camera on a sunny day with bay in background

Alison McClellan

Stanford University

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r python project-management research-facilitation research-grants biology computational-chemistry genomics+ 3 more

Timothy Middelkoop

Internet2

Research Engagement Engineer

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ACCESS CSSN, Campus Champions, CCMNet, Great Plains

Skills

workforce-development python batch-jobs kubernetes software-carpentry containers docker dependencies version-control spack software-installation singularity podman pip lmod interactive-mode putty slurm core-hours scheduling gcc jupyterhub programming programming-best-practices rstudio-server sql abstract citation community-outreach professional-development project-management proposal-development research-facilitation research-grants training jetstream osg affinity-group ACCESS-allocations bash environment-modules git git-lfs modules os permissions screen scripting ssh tcp tmux vim vm administering-hpc ansible cluster cluster-management cluster-support configuration-automation deployment DNS ethernet file-systems hardware hpc-cluster-architecture hpc-cluster-build hpc-getting-started hpc-operations hpc-storage hpc-tools htc infiniband interconnect networking nfs provisioning puppet unix-environment api debugging data-transfer data-sharing file-transfer github github-pages globus s3 quota scratch sftp aws azure cloud cloud-commercial cloud-computing cloud-open-source cloud-storage cloudlab gce openstack linear-programming open-storage-network+ 97 more

Sami Muslmani

University of Arizona

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biology physiology abstract citation community-outreach publication-database research-facilitation+ 2 more

Morgan Newton

Santa Monica College

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Od Odbadrakh

University of Tennessee, Knoxville

Computational Scientist

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Alyssa Pivirotto

Bryn Mawr College

Programs

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Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics+ 5 more

Oriana Silva

University of North Texas

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Sathish Srinivasan

Programs

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Skills

ai machine-learning big-data image-processing linear-programming data-analysis visualization data-lifecycle database github sftp cephfs data-provenance data-reproducibility data-wrangling benchmarking profiling fastx gatk opencv pytorch tensorflow galaxy pegasus ansible ceph administering-hpc cluster-management cluster cifs hpc-cluster-architecture networking nfs unix-environment smb hpc-tools prometheus bash cleanup environment-modules git git-lfs modules os permissions screen scripting ssh tcp tcsh tmux vim vm x11 c c++compiling css fortran gcc html java julia mathematica matlab perl programming pthreads python r rstudio-server sas scikit-learn spark spss sql stata xml hadoop batch-jobs lsf pbs slurm sge acls federated-authentication key-management firewall putty rdp vpn vnc terminal-emulation-and-window-management centos containers dependencies docker kubernetes lmod pip podman singularity software-installation version-control+ 99 more

Cesar Sul

University of Southern California

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Kaitlyn Varela

The University of Texas at San Antonio

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data-analysis optimization biology community-outreach

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