People

University of California-Riverside

Programs

Campus Champions

Skills

bash anaconda singularity modules gpfs slurm duo compiling conda jupyterhub mpi pip rstudio-server jekyll xml big-data data-management data-transfer file-formats aws cyverse training software-carpentry bioinformatics fastx gatk genomics smrt trinity gaussian gromacs amber charmm namd pytorch scikit-learn comsol atlas git github github-pages programming programming-best-practices cleanup version-control c pthreads c++fortran java python r sql xsede scheduling job-array pending-jobs pre-emption api batch-jobs checkpoint dmtcp docker kubernetes distributed-computing environment-modules parameter-sweeps cpu-bound scripting tmux screen terminal-emulation-and-window-management administering-hpc cluster-management cgroups prometheus cluster-support file-transfer globus x11 vpn ssh smb sftp samba rdp putty vnc federated-authentication cilogon hardware infiniband interconnect nvidia hpc-cluster-build gpu acls hpc-storage cifs nfs spectrum-scale networking dtn ethernet firewall sciencedmz tcp schedulers sge pbs encryption key-management software-installation easybuild spark unix-environment vim vm

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Daniel Howard

University Corporation for Atmospheric Research

HPC Consultant

Programs

ACCESS CSSN, Campus Champions, CCMNet, RMACC

Skills

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

Xiaoluo Jiao

Columbia University, Mailman School of Public Health

Programs

CAREERS

Skills

sas data-wrangling data-management data-reproducibility biology bioinformatics genomics machine-learning psychology git github programming cleanup r

Alexandra Lamtyugina

University of Chicago

Programs

ACCESS CSSN

Skills

Audrey Law

Bluegrass Community and Technical College

Instructor, Biotechnology Coordinator

Programs

Kentucky

Skills

data-analysis bioinformatics genomics git github unix-environment

shuai liu

University of Arkansas

Programs

ACCESS CSSN

Skills

Lenore Martin

University of Rhoide Island

Tenured Associate Professor

Programs

CAREERS

Skills

Vinayak Mathur

Cabrini University

Assistant Professor

Programs

CAREERS

Skills

bioinformatics genomics biology

Aidan McCrillis

University of Rhode Island

Programs

CAREERS

Skills

bioinformatics data-science biology python

Brett Milash

University of Utah

Scientific Consultant

Programs

RMACC

Skills

bioinformatics python

Daniel Morales

Florida International University

Programs

Campus Champions

Skills

Stanley Nwoji

Harrisburg University of Science and Technology

Professor

Programs

CAREERS

Skills

Nicholas Panchy

Michigan State University

Programs

Campus Champions

Skills

biology genomics open-ondemand slurm bash modules conda python r easybuild bioinformatics

Parameshwaran Pasupathy

Rutgers, the State University of New Jersey

Programs

ACCESS CSSN, CAREERS

Skills

Alyssa Pivirotto

Bryn Mawr College

Programs

ACCESS CSSN, Campus Champions

Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics

Ron Rahaman

Georgia Institute of Technology

Programs

Campus Champions

Skills

Sanguthevar Rajasekaran

University of Connecticut

Programs

CAREERS

Skills

William Sanders

The Jackson Laboratory

Director, Research IT Infrastructure and Data Services

Programs

Campus Champions

Skills

research-grants software-carpentry bioinformatics machine-learning programming c c++python containers

Michael Schnaitter

University of Pennsylvania

Programs

ACCESS CSSN

Skills

People

Skills

Organization

Program