People

Fernando Garzon

University of California, San Diego

Programs

ACCESS CSSN

Skills

Lev Gorenstein

Globus

Solutions architect

Programs

CCMNet

Skills

Rob Harbert

Stonehill College

Assistant Professor of Biology and Bioinformatics

Programs

Northeast

Skills

anaconda biology github big-data bioinformatics genomics gis r sas distributed-computing batch-jobs sftp ssh open-ondemand

Jordan Hayes

University of California-Riverside

Programs

Campus Champions

Skills

bash anaconda singularity modules gpfs slurm duo compiling conda jupyterhub mpi pip rstudio-server jekyll xml big-data data-management data-transfer file-formats aws cyverse training software-carpentry bioinformatics fastx gatk genomics smrt trinity gaussian gromacs amber charmm namd pytorch scikit-learn comsol atlas git github github-pages programming programming-best-practices cleanup version-control c pthreads c++fortran java python r sql xsede scheduling job-array pending-jobs pre-emption api batch-jobs checkpoint dmtcp docker kubernetes distributed-computing environment-modules parameter-sweeps cpu-bound scripting tmux screen terminal-emulation-and-window-management administering-hpc cluster-management cgroups prometheus cluster-support file-transfer globus x11 vpn ssh smb sftp samba rdp putty vnc federated-authentication cilogon hardware infiniband interconnect nvidia hpc-cluster-build gpu acls hpc-storage cifs nfs spectrum-scale networking dtn ethernet firewall sciencedmz tcp schedulers sge pbs encryption key-management software-installation easybuild spark unix-environment vim vm

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

Xiaoluo Jiao

Columbia University, Mailman School of Public Health

Programs

CAREERS

Skills

sas data-wrangling data-management data-reproducibility biology bioinformatics genomics machine-learning psychology git github programming cleanup r

Masoud Keramati

Northeastern University

Programs

ACCESS CSSN

Skills

Shubha Kope

Columbia University

Programs

Campus Champions

Skills

login password aws benchmarking scripting software-installation version-control lmod kubernetes vnc vpn putty sql python programming-best-practices

Amy Koshoffer

University of Cincinnati-Main Campus

Programs

Campus Champions

Skills

data-management data-lifecycle workflow doi file-formats biology

yaniv kovalski

Stonehill College

Programs

Northeast

Skills

biology github modules r

Kyle Krick

San Diego State University

Programs

ACCESS CSSN, Campus Champions

Skills

azure github-pages github api git vim programming programming-best-practices python jupyterhub sql cilogon kubernetes version-control containers docker

Louis Li

Brown University

Programs

ACCESS CSSN

Skills

shuai liu

University of Arkansas

Programs

ACCESS CSSN

Skills

Angelo Lucia

University of Rhode Island

Programs

Skills

monte-carlo biology computational-chemistry fortran matlab

Lenore Martin

University of Rhoide Island

Tenured Associate Professor

Programs

CAREERS

Skills

Vinayak Mathur

Cabrini University

Assistant Professor

Programs

CAREERS

Skills

bioinformatics genomics biology

woman facing camera on a sunny day with bay in background

Alison McClellan

Stanford University

Programs

ACCESS CSSN

Skills

r python project-management research-facilitation research-grants biology computational-chemistry genomics

Aidan McCrillis

University of Rhode Island

Programs

CAREERS

Skills

bioinformatics data-science biology python

Timothy Middelkoop

Internet2

Research Engagement Engineer

Programs

ACCESS CSSN, Campus Champions, CCMNet, Great Plains

Skills

workforce-development python batch-jobs kubernetes software-carpentry containers docker dependencies version-control spack software-installation singularity podman pip lmod interactive-mode putty slurm core-hours scheduling gcc jupyterhub programming programming-best-practices rstudio-server sql abstract citation community-outreach professional-development project-management proposal-development research-facilitation research-grants training jetstream osg affinity-group ACCESS-allocations bash environment-modules git git-lfs modules os permissions screen scripting ssh tcp tmux vim vm administering-hpc ansible cluster cluster-management cluster-support configuration-automation deployment DNS ethernet file-systems hardware hpc-cluster-architecture hpc-cluster-build hpc-getting-started hpc-operations hpc-storage hpc-tools htc infiniband interconnect networking nfs provisioning puppet unix-environment api debugging data-transfer data-sharing file-transfer github github-pages globus s3 quota scratch sftp aws azure cloud cloud-commercial cloud-computing cloud-open-source cloud-storage cloudlab gce openstack linear-programming open-storage-network

Daniel Morales

Florida International University

Programs

Campus Champions

Skills

Sami Muslmani

University of Arizona

Programs

ACCESS CSSN

Skills

biology physiology abstract citation community-outreach publication-database research-facilitation

Ahamed Arafaath Muthalif Mubarak Ali

New Jersey Institute of Technology

Programs

CAREERS

Skills

People

Skills

Organization

Program